miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|11695572|gb|BF599205.1|BF599205 GTTTGAGTGGACAGATGGATATCAAGTTCAAGGAATTCAGGTATTGATTCAACGGATCCAAATTGGAATCTTTTTTTGCA
TCAATTGCAAACTGAAAATCAGCGTCAGAAATTCACGGAACAGGTGCAAACGTTGACAGGTCGTTGTTGGGACGTGTGCT
TCTCGGATTATAGGCCTCCAAGCAAGTTGGACGGGAAAACACAAAACTGTATTAATAACTGTGTGAATAGGATGATTGAT
GCTAGTAATTTCATGGTGGAACATTTACAGAAAATGAGTNCTACTGAAATAAGTTAAAGTGACTGGATTTCAATCACAAA
TTTTAATGTTTGTGAATTATATATTTTTGAAATATATTGAAAATACTCTGTTATGCTTTTTTTATTGCTGTTTCTACATA
AATTGTTAGTTGTGGATATCTGTGGATGCAGCACCTTAAGTTTTAAGATCATCTACAATCTTAAAGTGCATTTTGCGCAT
TTACTTTGGTCGGCGCTTATAATATACTATT




Most similar to sp|Q616Q2|TIM8_CAEBR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q616Q2|TIM8_CAEBR Mitochondrial import inner membrane
           translocase subunit tim-8 OS=Caenorhabditis briggsae
           GN=tim-8 PE=3 SV=1
          Length = 83

 Score =  142 bits (359), Expect = 9e-34
 Identities = 65/79 (82%), Positives = 68/79 (86%)
 Frame = +1

Query: 43  IDSTDPNWNLFLHQLQTENQRQKFTEQVQTLTGRCWDVCFSDYRPPSKLDGKTQNCINNC 222
           +DS DP    FLHQLQ E QRQKFTEQV TLTGRCWDVCFSDYRPPSK+DGKTQ CI NC
Sbjct: 1   MDSADPQLARFLHQLQAETQRQKFTEQVHTLTGRCWDVCFSDYRPPSKMDGKTQTCIQNC 60

Query: 223 VNRMIDASNFMVEHLQKMS 279
           VNRMIDASNFMVEHL KM+
Sbjct: 61  VNRMIDASNFMVEHLSKMN 79